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@tieneupin tieneupin commented Nov 26, 2024

Part of ongoing work for issue #288 .

Key Changes:

  • Added entry points to trigger align-and-merge workflow and register its output in an SQL database
  • Updated entry point names for the other CLEM workflows; they are now standardised as "clem.[workflow_name]"

This PR is linked to this one, so they will need to go live together to prevent breakage.

@tieneupin tieneupin added enhancement New feature or request server Relates to the server component cryo-clem Part of the cryo-CLEM pipeline extension labels Nov 26, 2024
@tieneupin tieneupin self-assigned this Nov 26, 2024
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codecov bot commented Nov 26, 2024

Codecov Report

Attention: Patch coverage is 0.37736% with 264 lines in your changes missing coverage. Please review.

Project coverage is 27.23%. Comparing base (f99070b) to head (38ae39e).
Report is 3 commits behind head on main.

Additional details and impacted files
@@            Coverage Diff             @@
##             main     #411      +/-   ##
==========================================
- Coverage   27.77%   27.23%   -0.55%     
==========================================
  Files          72       75       +3     
  Lines        9883    10018     +135     
  Branches     1318     1328      +10     
==========================================
- Hits         2745     2728      -17     
- Misses       7044     7196     +152     
  Partials       94       94              

@tieneupin tieneupin force-pushed the trigger-clem-align-and-merge branch from 89fbd08 to ebfc163 Compare November 26, 2024 12:00
@tieneupin tieneupin changed the title Added entry point to request for align-and-merge job for CLEM workflow Added entry point to request for align-and-merge job for CLEM workflow and register its results Nov 29, 2024
@tieneupin tieneupin merged commit 67854bb into main Nov 29, 2024
17 checks passed
@tieneupin tieneupin deleted the trigger-clem-align-and-merge branch November 29, 2024 17:24
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3 participants