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Merged
tieneupin merged 2 commits into from
Nov 20, 2025
Merged

Update Dockerfiles #694

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bb1a0f9
Updated Python Docker images to latest 3.12 version
tieneupin Nov 18, 2025
612e222
Switch to IMOD 5.1.9
tieneupin Nov 18, 2025
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2 changes: 1 addition & 1 deletion Dockerfiles/murfey-instrument-server
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Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
# podman build --build-arg groupid=<groupid> --build-arg userid=<userid> --build-arg groupname=<groupname> --no-cache -f path/to/Dockerfiles/murfey-instrument-server -t murfey-instrument-server:<version> path/to/python-murfey

# Set up the base image to build with
FROM docker.io/library/python:3.12.10-slim-bookworm AS base
FROM docker.io/library/python:3.12-slim-bookworm AS base

# Install Vim in base image
RUN apt-get update && \
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8 changes: 4 additions & 4 deletions Dockerfiles/murfey-server
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Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
# podman build --build-arg groupid=<groupid> --build-arg userid=<userid> --build-arg groupname=<groupname> --no-cache -f path/to/Dockerfiles/murfey-server -t murfey-server:<version> path/to/python-murfey

# Set up the base image to build with
FROM docker.io/library/python:3.12.10-slim-bookworm AS base
FROM docker.io/library/python:3.12-slim-bookworm AS base

# Install Vim and PostgreSQL dependencies in base image
RUN apt-get update && \
Expand Down Expand Up @@ -35,10 +35,10 @@ RUN apt-get update && \
psycopg2-binary \
&& \
/venv/bin/python -m pip install /python-murfey[server] && \
curl https://bio3d.colorado.edu/imod/AMD64-RHEL5/imod_5.1.0_RHEL8-64_CUDA12.0.sh > imod_5.1.0_RHEL8-64_CUDA12.0.sh && \
chmod +x imod_5.1.0_RHEL8-64_CUDA12.0.sh && \
curl https://bio3d.colorado.edu/imod/AMD64-RHEL5/imod_5.1.9_RHEL8-64_CUDA12.0.sh > imod_5.1.9_RHEL8-64_CUDA12.0.sh && \
chmod +x imod_5.1.9_RHEL8-64_CUDA12.0.sh && \
mkdir imod && \
./imod_5.1.0_RHEL8-64_CUDA12.0.sh -dir imod -skip -y
./imod_5.1.9_RHEL8-64_CUDA12.0.sh -dir imod -skip -y


# Transfer completed builds to base image
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